UPDATE!
I got a call from the dealer late yesterday afternoon telling me that they had the car apart and the parts on the way. What I was told was that there are two bolts that hold the output shaft from falling out and that both of those bolts were sheared in half therefore causing my output shafts to fall out of the transaxle.
How the hell were these bolts sheared in half? They have no pressure on them, the torque is handled by the splines on the shafts not these bolts, so how did they break? Could they have just been loose and then broke? I have found several other bolts in my engine compartment that were hand tight within the first two days of ownership, but was hesitant about sharing that information with anybody because of the flak I'd been getting from friends and family about buying a ford. :ack
Has anybody else had problems like this?