If you want to have a matching 'standard' header bolt in that hole, all you have to do is back off all the header bolts on that bank juuuuuuust far enough so that you can slip a 'standard' bolt thru that particular 'flange hole (after removing the present stud/nut lash-up, of course). Then continually screw this NEW bolt down first as you retighten all the others. By continually 'snugging' that bolt down ahead of all the others, you ought find that you have all the header clearance you need. :cheers